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1.
Sci Total Environ ; 918: 170534, 2024 Mar 25.
Artigo em Inglês | MEDLINE | ID: mdl-38301793

RESUMO

Stormwater ponds frequently receive urban runoff, increasing the likelihood of pesticide contamination. Biofilms growing in surface waters of these ponds are known to accumulate a range of aquatic contaminants, paradoxically providing both water purification services and potentially posing a threat to urban wildlife. Thus, sampling biofilms in stormwater ponds may be a critical and biologically relevant tool for characterizing pesticide contamination and toxicity in urban environments. Here, we aimed to investigate pesticide occurrences at 21 stormwater ponds in Brampton, ON, one of Canada's fastest growing municipalities, and quantify their accumulation in biofilm. Over nine weeks, we collected time-integrated composite water and biofilm samples for analysis of ∼500 current-use and legacy pesticides. Thirty-two pesticide compounds were detected across both matrices, with 2,4-D, MCPA, MCPP, azoxystrobin, bentazon, triclopyr, and diuron having near-ubiquitous occurrences. Several compounds not typically monitored in pesticide suites (e.g., melamine and nicotine) were also detected, but only in biofilms. Overall, 56 % of analytes detected in biofilms were not found in water samples, indicating traditional pesticide monitoring practices fail to capture all exposure routes, as even when pesticides are below detection levels in water, organisms may still be exposed via dietary pathways. Calculated bioconcentration factors ranged from 4.2 to 1275 and were not predicted by standard pesticide physicochemical properties. Monitoring biofilms provides a sensitive and comprehensive supplement to water sampling for pesticide quantification in urban areas, and identifying pesticide occurrences in stormwater could improve source-tracking efforts in the future. Further research is needed to understand the mechanisms driving pesticide accumulation, to investigate toxicity risks associated with pesticide-contaminated biofilm, and to evaluate whether pesticide accumulation in stormwater pond biofilms represents a route through which contaminants are mobilized into the surrounding terrestrial and downstream aquatic environments.


Assuntos
Praguicidas , Poluentes Químicos da Água , Purificação da Água , Praguicidas/análise , Lagoas/química , Água/análise , Poluentes Químicos da Água/análise , Monitoramento Ambiental
2.
Environ Sci Pollut Res Int ; 31(7): 10184-10197, 2024 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-37160521

RESUMO

Grass carp (Ctenopharyngodon idellus) is the most productive freshwater fish in China, but its traditional aquaculture model still has problems, such as poor water quality and frequent diseases. We have taken monoculture and 80:20 polyculture grass carp ponds as the research object and used EwE software to build the Ecopath model of two ponds. We analyzed and compared the characteristics of ecological structure and energy flow in two ponds. The result showed the highest effective trophic level in the polyculture pond that was higher than that in the monoculture pond, and fish in polyculture had higher EE values which showed the production of fish in polyculture contributed more to the energy conversion efficiency of the ecosystem. Flows into detritus were the largest component of TST both in the two ponds, which accounted for 49.34% and 50.37%. And the average transfer efficiency in monoculture was 13.07%, while that in polyculture was 15.6%. The ascendency/total development capacity (A/TDC) and overhead/total development capacity (O/TDC) were 0.35 and 0.65 both in the two ponds, respectively, which indicated that both systems had a strong anti-perturbation ability, but the stability could be improved. Finn's cycling index (FCI) in polyculture was higher and showed that the polyculture pond was more mature and stable. Unused energy of functional groups will flow to detritus, and that in the monoculture pond was higher, the energy of C. idellus that flowed to detritus in monoculture was 48.17% higher than that in polyculture; unused energy of bacteria and phytoplankton were also high. The result showed that polyculture could improve energy utilization, increase transfer efficiency, and raise the stability of the ecosystem. Grass carp ponds still need to be improved in the aspects of mixed species and energy consumption. It is necessary to improve the ecological and economic benefits of grass carp ponds by optimizing the aquaculture structure and adjusting the aquaculture proportion.


Assuntos
Carpas , Animais , Lagoas/química , Ecossistema , Água Doce , China , Aquicultura
3.
Environ Monit Assess ; 196(1): 73, 2023 Dec 22.
Artigo em Inglês | MEDLINE | ID: mdl-38129741

RESUMO

This study elucidates the distribution and characteristics of microplastics (MPs) in 20 tropical freshwater ponds, located in the urban settlement of Raipur city in state of Chhattisgarh, India. The ponds were divided into 4 groups based on the habitat types to understand the influence of land use patterns and human activity on the distribution of MPs. Here, we provide an improved sampling technique that is economical, traditional, indigenous, independent of vessels or structures, and replicable for smaller waterbodies. The efficiency of the proposed method is closer to the traditional boat-based net sampling technique. MPs are ubiquitous in surface water samples of all 20 ponds. The average abundance of MPs was 2.52 ± 1.28 particles/L for bucket samples and 2.93 ± 1.34 particles/L for net samples. Among extracted MPs, fragments, films, and foams were dominant. MPs within size class 1 mm to 500 µm were prevailing for both bucket samples and tube-net samples. Color-wise, white/transparent and black MPs were abundant in both types of samples while the majority of MPs were polyethylene and polystyrene. The tube-net sampling method is economical and replicable and provides comparable results. This can help study MPs distribution in smaller inland waterbodies where boats and structures are not readily available to conduct net sampling. We provide the first insight into the distribution of MPs in urban ponds, and the results can be used to determine the ubiquity of MPs in urban ponds located in different regions of the subcontinent.


Assuntos
Microplásticos , Poluentes Químicos da Água , Humanos , Plásticos , Lagoas/química , Poluentes Químicos da Água/análise , Monitoramento Ambiental/métodos
4.
Sci Total Environ ; 904: 166291, 2023 Dec 15.
Artigo em Inglês | MEDLINE | ID: mdl-37586508

RESUMO

Karenia brevis blooms occur almost annually in southwest Florida, imposing significant ecological and human health impacts. Currently, 13 nutrient sources have been identified supporting blooms, including nearshore anthropogenic inputs such as stormwater and wastewater outflows. A 21-day bioassay was performed, where K. brevis cultures were inoculated with water sourced from three stormwater ponds along an age gradient (14, 18, and 34 yrs.) and one municipal wastewater effluent sample, with the aim of identifying biomolecular classes and transformations of dissolved organic matter (DOM) compounds used by K. brevis. All sample types supported K. brevis growth and showed compositional changes in their respective DOM pools. Fourier-transform ion cyclotron resonance mass spectrometry (FT-ICR MS) catalogued the molecular composition of DOM and identified specific compound classes that were biodegraded. Results showed that K. brevis utilized species across a wide range of compositions that correspond to amino sugars, humic, and lignin-like biomolecular classes. The municipal wastewater and the youngest stormwater pond (SWP 14) effluent contained the largest pools of labile DOM compounds which were bioavailable to K. brevis, which indicates younger stormwater pond effluents may be as ecologically important as wastewater effluents to blooms. Conversely, generation of DOM compounds of greater complexity and a wide range of aromaticity was observed with the older (SWP 18 and SWP 34) stormwater pond treatments. These data confirm the potential for stormwater ponds and/or wastewater to contribute nutrients which can potentially support K. brevis blooms, revealing the need for improved nutrient retention strategies to protect coastal waters from the potential ill effects of urban effluent.


Assuntos
Dinoflagelados , Proliferação Nociva de Algas , Humanos , Matéria Orgânica Dissolvida , Lagoas/química , Águas Residuárias
5.
Environ Res ; 232: 116336, 2023 Sep 01.
Artigo em Inglês | MEDLINE | ID: mdl-37321336

RESUMO

Tailings ponds, large man-made structures conceived during the mining process for waste storage, often become deserted post-mining, leaving behind a stark, contaminated landscape. This paper posits that these forsaken tailings ponds can be rejuvenated into fertile agricultural land through adept reclamation efforts. Serving as a discussion paper, it engages in a stimulating exploration of the environmental and health risks linked to tailings ponds. It sheds light on the potential and impediments in the transformation of these ponds into agricultural land. The discussion concludes that despite the substantial hurdles in repurposing tailings ponds for agriculture, there are encouraging prospects with the application of multifaceted efforts.


Assuntos
Agricultura , Lagoas , Humanos , Lagoas/química
6.
Water Res ; 235: 119825, 2023 May 15.
Artigo em Inglês | MEDLINE | ID: mdl-36905732

RESUMO

Smart stormwater systems equipped with real-time controls are transforming urban drainage management by enhancing the flood control and water treatment potential of previously static infrastructure. Real-time control of detention basins, for instance, has been shown to improve contaminant removal by increasing hydraulic retention times while also reducing downstream flood risk. However, to date, few studies have explored optimal real-time control strategies for achieving both water quality and flood control targets. This study advances a new model predictive control (MPC) algorithm for stormwater detention ponds that determines the outlet valve control schedule needed to maximize pollutant removal and minimize flooding using forecasts of the incoming pollutograph and hydrograph. Comparing MPC against three rule-based control strategies, MPC is found to be more effective at balancing between multiple competing control objectives such as preventing overflows, reducing peak discharges, and improving water quality. Moreover, when paired with an online data assimilation scheme based on Extended Kalman Filtering (EKF), MPC is found to be robust to uncertainty in both pollutograph forecasts and water quality measurements. By providing an integrated control strategy that optimizes both water quality and quantity goals while remaining robust to uncertainty in hydrologic and pollutant dynamics, this study paves the way for real-world smart stormwater systems that will achieve improved flood and nonpoint source pollution management.


Assuntos
Poluentes Ambientais , Inundações , Incerteza , Qualidade da Água , Lagoas/química , Chuva
7.
Environ Pollut ; 320: 121052, 2023 Mar 01.
Artigo em Inglês | MEDLINE | ID: mdl-36632967

RESUMO

Stormwater runoff is often assumed to be an important pathway for microplastics from the terrestrial to the marine environment, although few studies have attempted to quantify the significance of this pathway or the interactions between stormwater infrastructure and plastic pollution. The objective of this study was to determine what factors influence the concentrations and behaviors of microplastics in stormwater ponds. Samples were taken from the water and bottom sediments of six stormwater ponds in Tampa (Florida, USA) using a neuston net and a sediment dredger. They were processed using a combination of density separations, visual sorting, and Raman spectroscopy. Concentrations ranged by several orders of magnitude between sites and rounds of sampling (0.0-55.5 items/m3 in water, 2.5-203.0 items/kg dry weight in sediment) but were comparable to other studies. The sediments of fenced and residential sites had significantly lower plastic count concentrations, compared to unfenced sites with mixed land uses. The ratio of impervious drainage area to pond surface area was found to be positively correlated with sediment concentrations. Particle shapes in water were more variable than those found in sediments, suggesting that regular-shaped plastics tend to settle first. Circularity was identified as an important parameter in determining settling behaviors. Shape characteristics were similar to those observed in a downstream river, suggesting that degradation leading to the observed shapes occurred prior to entering the ponds. This study highlights the importance of stormwater infrastructure in understanding plastic transport and how plastic shape characteristics can impact their behavior in the environment.


Assuntos
Lagoas , Poluentes Químicos da Água , Lagoas/química , Plásticos , Microplásticos , Poluentes Químicos da Água/análise , Água , Monitoramento Ambiental/métodos , Sedimentos Geológicos/química
8.
Bioresour Technol ; 368: 128309, 2023 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-36370938

RESUMO

The external carbon source and the installation of periphyton structures were applied in combined intensive-extensive aquaculture to test their efficiency of nutrient utilization to support clean and efficient fish production. Two aquaculture systems were tested, with one additionally treated with methanol as a source of carbohydrates for microbial activity stimulation and an additional area for periphyton installed. Each system was composed of fish tanks with intensively reared sturgeon and one extensive pond stocked with common carp in polyculture. The water from intensive fish production was discharged into the fish pond, to serve as a nutrient source for primary production in the pond. Obtained data revealed that applied manipulations enhanced microorganism development and pond productivity. The results of the research show that applied moderate, nature-based upgrade in aquaculture system may allow for more efficient and cost-effective treatment of wastewater from intensive aquaculture.


Assuntos
Carpas , Perifíton , Animais , Aquicultura/métodos , Lagoas/química , Nutrientes
9.
PLoS One ; 17(12): e0278042, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-36520938

RESUMO

Despite Bangladesh being one of the leading countries in aquaculture food production worldwide, there is a considerable lack of updated scientific information about aquaculture activities in remote sites, making it difficult to manage sustainably. This study explored the use of geospatial and field data to monitor spatio-temporal changes in aquaculture production sites in the Satkhira district from 2017-2019. We used Shuttle Radar Topographic Mission digital elevation model (SRTM DEM) to locate aquaculture ponds based on the terrain elevation and slope. Radar backscatter information from the Sentinel-1 satellite, and different water indices derived from Sentinel-2 were used to assess the spatio-temporal extents of aquaculture areas. An image segmentation algorithm was applied to detect aquaculture ponds based on backscattering intensity, size and shape characteristics. Our results show that the highest number of aquaculture ponds were observed in January, with a size of more than 30,000 ha. Object-based image classification of Sentinel-1 data showed an overall accuracy above 80%. The key factors responsible for the variation in aquaculture were investigated using field surveys. We noticed that despite a significant number of aquaculture ponds in the study area, shrimp production and export are decreasing because of a lack of infrastructure, poor governance, and lack of awareness in the local communities. The result of this study can provide in-depth information about aquaculture areas, which is vital for policymakers and environmental administrators for successful aquaculture management in Satkhira, Bangladesh and other countries with similar issues.


Assuntos
Aquicultura , Lagoas , Animais , Bangladesh , Lagoas/química , Crustáceos , Radar
10.
Environ Sci Process Impacts ; 24(10): 1661-1677, 2022 Oct 19.
Artigo em Inglês | MEDLINE | ID: mdl-36004537

RESUMO

Wildfires, which are increasing in frequency and severity in the western U.S., impact water quality through increases in erosion, and transport of nutrients and metals. Meanwhile, beaver populations have been increasing since the early 1900s, and the ponds they create slow or impound hydrologic and elemental fluxes, increase soil saturation, and have a high potential to transform redox active elements (e.g., oxygen, nitrogen, sulfur, and metals). However, it remains unknown how the presence of beaver ponds in burned watersheds may impact retention and transformation of chemical constituents originating in burned uplands (e.g., pyrogenic dissolved organic matter; pyDOM) and the consequences for downstream water quality. Here, we investigate the impact of beaver ponds on the chemical properties and molecular composition of dissolved forms of C and N, and the microbial functional potential encoded within these environments. The chemistry and microbiology of surface water and sediment changed along a stream sequence starting upstream of fire and flowing through multiple beaver ponds and interconnecting stream reaches within a burned high-elevation forest watershed. The relative abundance of N-containing compounds increased in surface water of the burned beaver ponds, which corresponded to lower C/N and O/C, and higher aromaticity as characterized by Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS). The resident microbial communities lack the capacity to process such aromatic pyDOM, though genomic analyses demonstrate their potential to metabolize various compounds in the anaerobic sediments of the beaver ponds. Collectively, this work highlights the role of beaver ponds as biological "hotspots" with unique biogeochemistry in fire-impacted systems.


Assuntos
Nitrogênio , Lagoas , Animais , Lagoas/química , Nitrogênio/análise , Carbono/química , Roedores , Solo , Oxigênio/análise , Enxofre
11.
Environ Sci Pollut Res Int ; 29(44): 66858-66873, 2022 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-35513618

RESUMO

Pesticides are still widely used by agriculture, leading to the exposure of surface water. This may be the case for fish ponds located in farmland landscapes. To address this issue, the present study investigated the contamination by pesticides of fish ponds located in the mixed agriculture-pond landscape of the Dombes area, France. Ten ponds were selected in water catchments with a gradient of 3-57 ha of cropland with maize and winter cereals as the dominant crops. A total of 197 water samples were collected in the ponds during the fish production season over 3 years. Recently used pesticides were the most frequent residues occurring. Occurrences greater than 0.1 µgL-1 particularly concerned chlorotoluron and S-metolachlor. Maximum observed concentrations were slightly above 3 µgL-1 for S-metolachlor, acetochlor, and dimethenamide, all herbicides allowed for maize cultivation. Isoproturon and chlorotoluron, herbicides allowed in cereal crops, reached up to 1.2 and 1.0 µgL-1, respectively. We found a significant positive effect of crop area in catchments on the pond contamination frequency by pesticides and more significantly on the contamination frequency by broad-spectrum herbicides (glyphosate and AMPA residues). The cumulative antecedent rainfall was best correlated to the frequency of highest contaminations (> 0.5 µgL-1). In such a hydrological context, the crop area within catchment was identified as a good indicator of fish pond exposure to pesticide residues. Finally, we proposed to adapt some mitigation measures to reduce fish pond contamination.


Assuntos
Herbicidas , Resíduos de Praguicidas , Praguicidas , Poluentes Químicos da Água , Acetamidas , Animais , Monitoramento Ambiental , Fazendas , Peixes , Resíduos de Praguicidas/análise , Praguicidas/análise , Compostos de Fenilureia , Lagoas/química , Água , Poluentes Químicos da Água/análise , Ácido alfa-Amino-3-hidroxi-5-metil-4-isoxazol Propiônico
12.
PLoS One ; 17(3): e0265576, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-35298558

RESUMO

While high rate algal ponds (HRAPs) can provide efficient pathogen removal from wastewater, the mechanisms involved remain unclear. To address this knowledge gap, the mechanisms potentially causing Escherichia coli (E. coli) removal during microalgae-based wastewater treatment were successively assessed using laboratory microcosms designed to isolate known mechanisms, and bench scale assays performed in real HRAP broth. During laboratory assays, E. coli decay was only significantly increased by alkaline pH (above temperature-dependent thresholds) due to pH induced toxicity, and direct sunlight exposure via UV-B damage and/or endogenous photo-oxidation. Bench assays confirmed alkaline pH toxicity caused significant decay but sunlight-mediated decay was not significant, likely due to light attenuation in the HRAP broth. Bench assays also evidenced the existence of uncharacterized 'dark' decay mechanism(s) not observed in laboratory microcosms. To numerically evaluate the contribution of each mechanism and the uncertainty associated, E. coli decay was modelled assuming dark decay, alkaline pH induced toxicity, and direct sunlight-mediated decay were independent mechanisms. The simulations confirmed E. coli decay was mainly caused by dark decay during bench assays (48.2-89.5% estimated contribution to overall decay at the 95% confidence level), followed by alkaline-pH induced toxicity (8.3-46.5%), and sunlight-mediated decay (0.0-21.9%).


Assuntos
Lagoas , Purificação da Água , Escherichia coli , Lagoas/química , Eliminação de Resíduos Líquidos , Águas Residuárias/química
13.
Environ Sci Pollut Res Int ; 29(31): 47462-47487, 2022 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-35182337

RESUMO

The present field study evaluates the health status of the catfish Clarias batrachus reared in coal mine effluent (CME)-fed pond water at Rajrappa mining complex using biochemical, haematological and histopathological parameters. Simultaneously, risk assessment along with recovery response of the CME intoxicated fish following their treatment with CME-free freshwater was also studied. The CME-fed pond water fish revealed significant decrease in biomolecules concentrations and considerable increase in activities of several enzymes along with metallothionein level as compared to control. The impaired regulation of metabolic function was also revealed by blood parameters showing significant decrease in haemoglobin content (8.78 ± 0.344 g/100 mL) and red blood cells count (1.77 ± 0.12 × 106 mm3) while substantial elevation in white blood cells (187.13 ± 9.78 × 103 mm3). The histopathological study also confirmed the changes including hypertrophy of club cells of skin, swelling of secondary lamella of gills, extensive fibrosis in liver and glomerular shrinkage with increased Bowman's space in kidney. Potential health risk assessments based on estimated daily intake and target hazard quotient indicated health risks associated with the consumption of such fishes. The CME-contaminated fish when transferred to CME-free freshwater exhibited decreased metal content accompanied by eventual recovery response as evident by retrieval in biochemical and haematological parameters. Withdrawal study also revealed restoration in the activity of different marker enzymes in fish tissues including blood as well as recovery in their cellular architecture. The results of the present study validate the depuration process as an effective practice for detoxification of fish contaminated with effluent.


Assuntos
Peixes-Gato , Nível de Saúde , Lagoas , Animais , Peixes-Gato/metabolismo , Minas de Carvão , Lagoas/química , Medição de Risco
14.
Sci Data ; 8(1): 221, 2021 08 19.
Artigo em Inglês | MEDLINE | ID: mdl-34413318

RESUMO

Thermokarst activity at permafrost sites releases considerable amounts of ancient carbon to the atmosphere. A large part of this carbon is released via thermokarst ponds, and fungi could be an important organismal group enabling its recycling. However, our knowledge about aquatic fungi in thermokarstic systems is extremely limited. In this study, we collected samples from five permafrost sites distributed across circumpolar Arctic and representing different stages of permafrost integrity. Surface water samples were taken from the ponds and, additionally, for most of the ponds also the detritus and sediment samples were taken. All the samples were extracted for total DNA, which was then amplified for the fungal ITS2 region of the ribosomal genes. These amplicons were sequenced using PacBio technology. Water samples were also collected to analyze the chemical conditions in the ponds, including nutrient status and the quality and quantity of dissolved organic carbon. This dataset gives a unique overview of the impact of the thawing permafrost on fungal communities and their potential role on carbon recycling.


Assuntos
Fungos/classificação , Micobioma , Pergelissolo/microbiologia , Lagoas/microbiologia , Regiões Árticas , Código de Barras de DNA Taxonômico , DNA Fúngico/genética , DNA Fúngico/isolamento & purificação , DNA Espaçador Ribossômico/genética , Congelamento , Fungos/genética , Fungos/isolamento & purificação , Lagoas/química
15.
Sci Rep ; 11(1): 11637, 2021 06 02.
Artigo em Inglês | MEDLINE | ID: mdl-34079031

RESUMO

Ecological surveys risk incurring false negative and false positive detections of the target species. With indirect survey methods, such as environmental DNA, such error can occur at two stages: sample collection and laboratory analysis. Here we analyse a large qPCR based eDNA data set using two occupancy models, one of which accounts for false positive error by Griffin et al. (J R Stat Soc Ser C Appl Stat 69: 377-392, 2020), and a second that assumes no false positive error by Stratton et al. (Methods Ecol Evol 11: 1113-1120, 2020). Additionally, we apply the Griffin et al. (2020) model to simulated data to determine optimal levels of replication at both sampling stages. The Stratton et al. (2020) model, which assumes no false positive results, consistently overestimated both overall and individual site occupancy compared to both the Griffin et al. (2020) model and to previous estimates of pond occupancy for the target species. The inclusion of replication at both stages of eDNA analysis (sample collection and in the laboratory) reduces both bias and credible interval width in estimates of both occupancy and detectability. Even the collection of > 1 sample from a site can improve parameter estimates more than having a high number of replicates only within the laboratory analysis.


Assuntos
DNA Ambiental/genética , Metagenômica/normas , Reação em Cadeia da Polimerase em Tempo Real/normas , Manejo de Espécimes/normas , Animais , DNA Ambiental/isolamento & purificação , Ecossistema , Metagenômica/métodos , Plantas/classificação , Plantas/genética , Lagoas/química , Reino Unido
16.
Sci Data ; 8(1): 131, 2021 05 14.
Artigo em Inglês | MEDLINE | ID: mdl-33990618

RESUMO

Stratified lakes and ponds featuring steep oxygen gradients are significant net sources of greenhouse gases and hotspots in the carbon cycle. Despite their significant biogeochemical roles, the microbial communities, especially in the oxygen depleted compartments, are poorly known. Here, we present a comprehensive dataset including 267 shotgun metagenomes from 41 stratified lakes and ponds mainly located in the boreal and subarctic regions, but also including one tropical reservoir and one temperate lake. For most lakes and ponds, the data includes a vertical sample set spanning from the oxic surface to the anoxic bottom layer. The majority of the samples were collected during the open water period, but also a total of 29 samples were collected from under the ice. In addition to the metagenomic sequences, the dataset includes environmental variables for the samples, such as oxygen, nutrient and organic carbon concentrations. The dataset is ideal for further exploring the microbial taxonomic and functional diversity in freshwater environments and potential climate change impacts on the functioning of these ecosystems.


Assuntos
Lagos/microbiologia , Metagenoma , Microbiota/genética , Oxigênio/análise , Lagoas/microbiologia , Archaea/classificação , Archaea/genética , Bactérias/classificação , Bactérias/genética , Ciclo do Carbono , Mudança Climática , Gases de Efeito Estufa/análise , Lagos/química , Filogenia , Lagoas/química
17.
Arch Microbiol ; 203(5): 2521-2540, 2021 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-33677634

RESUMO

The acid ponds of the Danakil Depression in northern Ethiopia are polyextreme environments that exceed the normal physicochemical limits of pH, salinity, ion content, and temperature. We tested for the occurrence of DNA-based life in this environment using Metagenomic Shotgun DNA sequencing approaches. The obtained sequences were examined by the bioinformatic tools MetaSpades, DIAMOND and MEGAN 6-CE, and we were able to bin more than 90% of the metagenomics contigs of Dallol and Black Water to the Bacteria domain, and to the Proteobacteria phylum. Predictions of gene function based on SEED disclosed the presence of different nutrient cycles in the acid ponds. For this study, we focused on partial or completely sequenced genes involved in nitrogen metabolism. The KEGG nitrogen metabolism pathway mapping results for both acid ponds showed that all the predicted genes are involved directly or indirectly in the assimilation of ammonia and no dissimilation or nitrification process was identified. Furthermore, the deduced nitrogen fixation in the two acid ponds based on SEED classification indicated the presence of different sets of nitrogen fixing (nif) genes for biosynthesis and maturation of nitrogenase. Based on the in silico analysis, the predicted proteins involved in nitrogen fixation, especially the cysteine desulfurase and [4Fe-4S] ferredoxin, from both acid ponds are unique with less than 80% sequence similarity to the next closest protein sequence. Considering the extremity of the environmental conditions of the two acid ponds in the Danakil depression, this metagenomics dataset can add to the study of unique gene functions in nitrogen metabolism that enable thriving biocommunities in hypersaline and highly acidic conditions.


Assuntos
Bactérias/metabolismo , Ambientes Extremos , Nitrogênio/metabolismo , Amônia/metabolismo , Bactérias/genética , Proteínas de Bactérias/genética , Simulação por Computador , Metagenômica , Fixação de Nitrogênio/genética , Nitrogenase/genética , Lagoas/química , Lagoas/microbiologia
18.
Nat Microbiol ; 6(4): 479-488, 2021 04.
Artigo em Inglês | MEDLINE | ID: mdl-33510474

RESUMO

Small lakes and ponds occupy an enormous surface area of inland freshwater and represent an important terrestrial-water interface. Disturbances caused by extreme weather events can have substantial effects on these ecosystems. Here, we analysed the dynamics of nutrients and the entire plankton community in two flood events and afterwards, when quasi-stable conditions were established, to investigate the effect of such disturbances on a small forest pond. We show that floodings result in repeated washout of resident organisms and hundredfold increases in nutrient load. Despite this, the microbial community recovers to a predisturbance state within two weeks of flooding through four well-defined succession phases. Reassembly of phytoplankton and especially zooplankton takes up to two times longer and features repetitive and adaptive patterns. Release of dissolved nutrients from the pond is associated with inflow rates and community recovery, and returns to predisturbance levels before microbial compositions recover. Our findings shed light on the mechanisms underlying functional resilience of small waterbodies and are relevant to global change-induced increases in weather extremes.


Assuntos
Clima Extremo , Água Doce/microbiologia , Microbiota , Chuva , Animais , Inundações , Cadeia Alimentar , Florestas , Água Doce/química , Nutrientes/análise , Plâncton/crescimento & desenvolvimento , Lagoas/química , Lagoas/microbiologia , Rios/química , Rios/microbiologia
19.
Arch Microbiol ; 203(4): 1439-1450, 2021 May.
Artigo em Inglês | MEDLINE | ID: mdl-33392625

RESUMO

Chlamydomonas reinhardtii is one of the most characterized green algae. The open-pond cultivation can be challenging due to sensitivity of strain to fluctuating environmental conditions and unavailability of low-cost photoautotrophic media. In this study, the photoautotrophic growth of C. reinhardtii was evaluated in 1-m2 open ponds placed in greenhouse. Sodium bicarbonate (NaHCO3) was evaluated as an alternative buffering agent to tris. The effect of buffer and pH was tested. The growth was studied in the presence of various nitrogen [urea and ammonium bicarbonate (NH4HCO3)] sources. In the study, it was found that 125-ppm NaHCO3 as an optimum concentration. The buffering agent in the media was found to have major impact on growth. Without buffering agent, culture did not grow, and pH drop was observed. The sodium bicarbonate-buffered media reported to have the lowest bacterial contamination (18.3%), highest AFDW per OD (0.39 ± 0.027 g/L) and higher Fv/Fm (0.714 ± 0.016), whereas these values were found to be 62%, 0.19 ± 0.02 g/L and 0.537 ± 0.053 for tris-grown culture, respectively. The pH 7.0-7.5 was determined as an optimum, whereas pH 6.5-7.0 and 8.0-8.5 were found to affect the growth and induce palmelloidy. The OD and AFDW of culture grown in NH4HCO3 were found equivalent to a standard nitrogen source (NH4Cl), whereas culture shown poor growth in urea. Based on these data, NH4HCO3 media recipe and the optimized cultivation parameters were selected for photoautotrophic cultivation of Chlamydomonas in greenhouse open ponds.


Assuntos
Processos Autotróficos , Chlamydomonas reinhardtii/crescimento & desenvolvimento , Processos Fototróficos , Lagoas/química , Chlamydomonas reinhardtii/metabolismo , Meios de Cultura/química , Concentração de Íons de Hidrogênio , Nitrogênio/análise , Bicarbonato de Sódio/análise
20.
Lett Appl Microbiol ; 72(2): 157-166, 2021 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-33012031

RESUMO

Successive microbes in solar salt ponds are essential since it is well correlated with the quality of salt produced. This research aimed to analyse the microbial diversity of the solar salt ponds in Indonesia, which use high-density polyethylene in the ponds. There are two systems, that is, an integrated open system (In-system) and a closed system (Tt-system). The In-system uses seawater while the Tt-system uses seawater from the saline artesian well. Results showed that the In-system had richer microbes than the Tt-system. Both systems shared similar halophilic microbes profile. Ponds with low salinity (3-4 Be) had very low archaea, that is, 0·2 and 0·7% for the In-system and Tt-system respectively and were dominantly inhabited by phylum Proteobacteria. In the pond with high salinity, that is, 25 Be, both systems were dominated by the phylum Euryarchaeota, family Halobacteriaceae, and genera Halorubrum was dominantly found in In25 ponds and Tt25 ponds. Even though the two systems use the same parent seawater, that is, the Java Sea and share similar microbial composition at the phylum level, we found the dominance identified microbes in both systems were different.


Assuntos
Halorubrum/classificação , Lagoas/microbiologia , Proteobactérias/classificação , Água do Mar/microbiologia , Halorubrum/isolamento & purificação , Indonésia , Oceanos e Mares , Filogenia , Lagoas/química , Proteobactérias/isolamento & purificação , Salinidade , Cloreto de Sódio
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